brukerapi-python/.github/workflows/python-ci.yml at master · isi-nmr/brukerapi-python · GitHub

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name: CI

on:
  push:
    branches: [ master, dev, "dev_JV" ]
  pull_request:
    branches: [ master ]

jobs:

  # ------------------------------------------------------------
  # 1) INSTALL-ONLY MATRIX
  # ------------------------------------------------------------
  install:
    name: Install check (Python ${{ matrix.python-version }})
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12", "3.13"]

    steps:
    - name: Checkout repository
      uses: actions/checkout@v6

    - name: Set up Python
      uses: actions/setup-python@v6
      with:
        python-version: ${{ matrix.python-version }}

    - name: Upgrade pip and build tools
      run: python -m pip install --upgrade pip setuptools wheel build

    - name: Install brukerapi (no tests)
      run: |
        git clone https://github.com/isi-nmr/brukerapi-python.git
        cd brukerapi-python
        pip install -e . --use-pep517

  # ------------------------------------------------------------
  # 2) FULL TEST JOB
  # ------------------------------------------------------------
  test:
    name: Full tests (Python 3.13)
    runs-on: ubuntu-latest
    needs: install

    strategy:
      matrix:
        python-version: ["3.13"]

    steps:
    - name: Checkout repository
      uses: actions/checkout@v6

    - name: Set up Python
      uses: actions/setup-python@v6
      with:
        python-version: ${{ matrix.python-version }}

    - name: Upgrade pip and build tools
      run: python -m pip install --upgrade pip setuptools wheel build

    - name: Install brukerapi with dev dependencies
      run: |
        git clone https://github.com/isi-nmr/brukerapi-python.git
        cd brukerapi-python
        pip install pytest zenodo_get pytest-cov
        pip install -e .[dev] --use-pep517

    - name: Cache Zenodo data
      uses: actions/cache@v5
      with:
        path: test/zenodo_zips
        key: zenodo-4522220

    - name: Run all dataset tests
      run: |
        python -m pytest test -v --cov=brukerapi --cov-branch --cov-report=xml --cov-report=term-missing --cov-report=html

    - name: Upload coverage HTML
      uses: actions/upload-artifact@v7
      with:
        name: coverage-report
        path: htmlcov/

    - name: Print total coverage
      run: |
        echo "Total coverage:"
        python - <<EOF
        import xml.etree.ElementTree as ET
        tree = ET.parse('coverage.xml')
        root = tree.getroot()
        line_rate = float(root.attrib['line-rate']) * 100
        print(f"{line_rate:.2f}%")
        EOF