Skip to content
@SCAI-BIO

Fraunhofer SCAI Bioinformatics Department

Deparment of Bioinformatics at Fraunhofer SCAI

Popular repositories Loading

  1. MultiGML MultiGML Public

    MultiGML

    Python 10 5

  2. MultiNODEs MultiNODEs Public

    Python 8 2

  3. ExMed-BERT ExMed-BERT Public

    Python 8 3

  4. STEP STEP Public

    Data and code for STEP (Siamese Twin deep sequence Embedding of Proteins) approach.

    Python 6 3

  5. datastew datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    Python 6

  6. ADHTEB ADHTEB Public

    ADHTEB - Alzheimers Disease Harmonization Text Embedding Benchmark

    Python 5

Repositories

Showing 10 of 49 repositories
  • ADHTEB Public

    ADHTEB - Alzheimers Disease Harmonization Text Embedding Benchmark

    SCAI-BIO/ADHTEB’s past year of commit activity
    Python 5 Apache-2.0 0 1 (1 issue needs help) 1 Updated Mar 29, 2026
  • kitsune Public

    Kitsune is a next-generation data steward and harmonization tool.

    SCAI-BIO/kitsune’s past year of commit activity
    TypeScript 3 Apache-2.0 1 10 2 Updated Mar 27, 2026
  • datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    SCAI-BIO/datastew’s past year of commit activity
    Python 6 Apache-2.0 0 7 0 Updated Mar 27, 2026
  • syndat Public

    Synthetic data quality evaluation & visualization

    SCAI-BIO/syndat’s past year of commit activity
    Python 4 MIT 0 7 0 Updated Mar 27, 2026
  • PDataViewer Public

    Parkinsons Disease cohort landscape visualization

    SCAI-BIO/PDataViewer’s past year of commit activity
    TypeScript 3 Apache-2.0 0 3 9 Updated Mar 25, 2026
  • psychstrata-dashboard Public

    Treatment Resistance (TR) Prediction Dashboard

    SCAI-BIO/psychstrata-dashboard’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Mar 23, 2026
  • primekg-rag Public

    RAG-based method for mapping variables to PrimeKG subgraphs with textual graph descriptions.

    SCAI-BIO/primekg-rag’s past year of commit activity
    Python 2 Apache-2.0 0 0 0 Updated Mar 11, 2026
  • covid-NDD-comorbidity-NLP Public

    This work aims to integrate diverse, curated biological databases with a comprehensive analysis of the growing body of literature on the potential long-term neurological consequences of COVID-19 infections, employing advanced natural language processing and text mining techniques.

    SCAI-BIO/covid-NDD-comorbidity-NLP’s past year of commit activity
    Jupyter Notebook 4 0 0 0 Updated Mar 9, 2026
  • tau-kg-extension-nlp Public

    Extending the Tau subgraph within the pharmacome using NLP.

    SCAI-BIO/tau-kg-extension-nlp’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 6, 2026
  • pytmle Public

    A Flexible Python Implementation of Targeted Estimation for Survival and Competing Risks Analysis

    SCAI-BIO/pytmle’s past year of commit activity
    Python 2 Apache-2.0 1 0 1 Updated Feb 19, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…