GitHub - fmicompbio/IVMC-protocol

An organoid model of the menstrual cycle reveals the role of the luminal epithelium in regeneration of the human endometrium

This repository contains the code used to perform the computational analysis and generate the figures in

Nikolakopoulou et al: An organoid model of the menstrual cycle reveals the role of the luminal epithelium in regeneration of the human endometrium. bioRxiv (2025)

Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
bulkRNAseq_timecourse		bulkRNAseq_timecourse
scRNAseq_invivo_endometrium_cell_atlas		scRNAseq_invivo_endometrium_cell_atlas
scRNAseq_invivo_endometrium_epithelial_cell_atlas		scRNAseq_invivo_endometrium_epithelial_cell_atlas
scRNAseq_timecourse		scRNAseq_timecourse
LICENSE		LICENSE
README.md		README.md
helpers.R		helpers.R
index.html		index.html
index.qmd		index.qmd
params.R		params.R