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ohmeta

Only one command for microbiome research

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metapi metapi Public

A general metagenomics data mining system focus on robust microbiome research

Python 60 19
quantpi quantpi Public

Microbiome profiling

Python 15 4
qiimepi qiimepi Public

Snakemake version of QIIME2

Python 1
dadapi dadapi Public

Snakemake version of DADA2

Repositories

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Showing 10 of 62 repositories

atmpi Public
ASV-to-MAG Matching pipeline

ohmeta/atmpi’s past year of commit activity

Python 0 0 0 0 Updated Mar 19, 2026
skillpi Public
Working in progress (Don't use it)

ohmeta/skillpi’s past year of commit activity

Python 0 0 0 0 Updated Mar 18, 2026
metapi Public
A general metagenomics data mining system focus on robust microbiome research

ohmeta/metapi’s past year of commit activity

Python 60 GPL-3.0 19 2 0 Updated Mar 3, 2026
microlens Public

ohmeta/microlens’s past year of commit activity

R 0 0 0 0 Updated Dec 5, 2025
quantpi Public
Microbiome profiling

ohmeta/quantpi’s past year of commit activity

Python 15 GPL-3.0 4 0 0 Updated Nov 20, 2025
singpi Public

ohmeta/singpi’s past year of commit activity

0 0 0 0 Updated Nov 20, 2025
magpi Public

ohmeta/magpi’s past year of commit activity

0 0 0 0 Updated Nov 11, 2025
biotk Public

ohmeta/biotk’s past year of commit activity

Python 0 0 0 0 Updated Nov 6, 2025
qcpi Public

ohmeta/qcpi’s past year of commit activity

0 0 0 0 Updated Nov 4, 2025
dadapi Public
Snakemake version of DADA2

ohmeta/dadapi’s past year of commit activity

0 0 0 0 Updated Aug 7, 2025

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